Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
GPC3P51654 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
GPC3P51654 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.69■□□□□ 0.42
GPC3P51654 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC3P51654 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
GPC3P51654 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 AC004987.2-201ENST00000395959 1148 ntBASIC17.68■□□□□ 0.42
GPC3P51654 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 DFFBP1-201ENST00000433250 979 ntBASIC17.68■□□□□ 0.42
GPC3P51654 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC3P51654 GAPDHP21-201ENST00000450301 1010 ntBASIC17.68■□□□□ 0.42
GPC3P51654 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 AL596325.1-201ENST00000563991 1082 ntBASIC17.68■□□□□ 0.42
GPC3P51654 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GPC3P51654 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.68■□□□□ 0.42
GPC3P51654 AC025048.3-201ENST00000590609 569 ntBASIC17.68■□□□□ 0.42
GPC3P51654 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.68■□□□□ 0.42
GPC3P51654 AC005702.4-201ENST00000618393 416 ntBASIC17.68■□□□□ 0.42
GPC3P51654 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC3P51654 AL358472.5-202ENST00000641448 1267 ntBASIC17.68■□□□□ 0.42
GPC3P51654 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.68■□□□□ 0.42
GPC3P51654 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.68■□□□□ 0.42
GPC3P51654 AC063926.2-201ENST00000623766 1308 ntBASIC17.68■□□□□ 0.42
GPC3P51654 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GPC3P51654 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
GPC3P51654 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GPC3P51654 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
GPC3P51654 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 RN7SL692P-201ENST00000464677 288 ntBASIC17.67■□□□□ 0.42
GPC3P51654 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
GPC3P51654 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GPC3P51654 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GPC3P51654 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.67■□□□□ 0.42
GPC3P51654 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GPC3P51654 AC018695.7-201ENST00000624587 2492 ntBASIC17.66■□□□□ 0.42
GPC3P51654 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.66■□□□□ 0.42
GPC3P51654 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.66■□□□□ 0.42
GPC3P51654 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.66■□□□□ 0.42
GPC3P51654 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
GPC3P51654 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms