Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
IDH3AP50213 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3AP50213 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
IDH3AP50213 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3AP50213 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3AP50213 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
IDH3AP50213 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3AP50213 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
IDH3AP50213 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.64■□□□□ 0.1
IDH3AP50213 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 KRT8P44-201ENST00000441609 1350 ntBASIC15.64■□□□□ 0.09
IDH3AP50213 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 MRPL20P1-201ENST00000400819 433 ntBASIC15.64■□□□□ 0.09
IDH3AP50213 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.64■□□□□ 0.09
IDH3AP50213 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.64■□□□□ 0.09
IDH3AP50213 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.64■□□□□ 0.09
IDH3AP50213 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.64■□□□□ 0.09
IDH3AP50213 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.64■□□□□ 0.09
IDH3AP50213 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.64■□□□□ 0.09
IDH3AP50213 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.64■□□□□ 0.09
IDH3AP50213 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
IDH3AP50213 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
IDH3AP50213 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 RPS2P1-201ENST00000434010 821 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 MIR4321-201ENST00000592276 80 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 AL121772.3-201ENST00000610840 674 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.63■□□□□ 0.09
IDH3AP50213 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 LINC00552-201ENST00000625151 2579 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 AC007191.1-201ENST00000623179 2995 ntBASIC15.63■□□□□ 0.09
IDH3AP50213 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
IDH3AP50213 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
IDH3AP50213 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
IDH3AP50213 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.62■□□□□ 0.09
IDH3AP50213 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 WASH6P-202ENST00000359512 1437 ntBASIC15.62■□□□□ 0.09
IDH3AP50213 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.62■□□□□ 0.09
IDH3AP50213 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IDH3AP50213 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.62■□□□□ 0.09
IDH3AP50213 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 AKR1C7P-201ENST00000305623 895 ntBASIC15.62■□□□□ 0.09
IDH3AP50213 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
IDH3AP50213 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
IDH3AP50213 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.62■□□□□ 0.09
IDH3AP50213 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms