Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
SLC6A12P48065 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC6A12P48065 AZGP1P1-201ENST00000411909 902 ntBASIC15.45■□□□□ 0.06
SLC6A12P48065 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
SLC6A12P48065 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC6A12P48065 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC023511.2-201ENST00000618803 211 ntBASIC15.45■□□□□ 0.06
SLC6A12P48065 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.45■□□□□ 0.06
SLC6A12P48065 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.45■□□□□ 0.06
SLC6A12P48065 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 AL035456.1-201ENST00000456064 1369 ntBASIC15.45■□□□□ 0.06
SLC6A12P48065 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SLC6A12P48065 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
SLC6A12P48065 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SLC6A12P48065 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 AC104640.1-201ENST00000562617 2109 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.44■□□□□ 0.06
SLC6A12P48065 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
SLC6A12P48065 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 SSR4P1-203ENST00000599569 2260 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 DNAJB3-202ENST00000449667 1266 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.44■□□□□ 0.06
SLC6A12P48065 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.44■□□□□ 0.06
SLC6A12P48065 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.44■□□□□ 0.06
SLC6A12P48065 MIR4453-201ENST00000584019 89 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 RN7SL828P-201ENST00000607615 303 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 MIR6080-201ENST00000617359 66 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 AC126177.1-201ENST00000547829 2218 ntBASIC15.44■□□□□ 0.06
SLC6A12P48065 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SLC6A12P48065 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
SLC6A12P48065 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SLC6A12P48065 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.43■□□□□ 0.06
SLC6A12P48065 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 AC092127.1-201ENST00000567093 3455 ntBASIC15.43■□□□□ 0.06
SLC6A12P48065 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.43■□□□□ 0.06
SLC6A12P48065 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SLC6A12P48065 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms