Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AC074338.1-201ENST00000416825 156 ntBASIC18.84■□□□□ 0.61
NEDD4P46934 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.84■□□□□ 0.61
NEDD4P46934 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.84■□□□□ 0.61
NEDD4P46934 SPDYE18-201ENST00000510091 1050 ntBASIC18.84■□□□□ 0.61
NEDD4P46934 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 AC004840.1-201ENST00000636359 365 ntBASIC18.84■□□□□ 0.61
NEDD4P46934 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
NEDD4P46934 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NEDD4P46934 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.84■□□□□ 0.61
NEDD4P46934 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.84■□□□□ 0.61
NEDD4P46934 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NEDD4P46934 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.83■□□□□ 0.61
NEDD4P46934 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.83■□□□□ 0.61
NEDD4P46934 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.83■□□□□ 0.61
NEDD4P46934 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
NEDD4P46934 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NEDD4P46934 FO393414.2-201ENST00000405153 598 ntBASIC18.83■□□□□ 0.61
NEDD4P46934 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.83■□□□□ 0.61
NEDD4P46934 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.83■□□□□ 0.61
NEDD4P46934 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.83■□□□□ 0.61
NEDD4P46934 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 AL450472.2-201ENST00000603663 1156 ntBASIC18.83■□□□□ 0.61
NEDD4P46934 AC097359.3-201ENST00000603982 1210 ntBASIC18.83■□□□□ 0.61
NEDD4P46934 AL109936.8-201ENST00000641772 604 ntBASIC18.83■□□□□ 0.61
NEDD4P46934 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NEDD4P46934 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.83■□□□□ 0.6
NEDD4P46934 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.83■□□□□ 0.6
NEDD4P46934 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.83■□□□□ 0.6
NEDD4P46934 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NEDD4P46934 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
NEDD4P46934 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NEDD4P46934 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NEDD4P46934 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.82■□□□□ 0.6
NEDD4P46934 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC18.82■□□□□ 0.6
NEDD4P46934 ZNF890P-202ENST00000530367 1156 ntBASIC18.82■□□□□ 0.6
NEDD4P46934 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC18.82■□□□□ 0.6
NEDD4P46934 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.82■□□□□ 0.6
NEDD4P46934 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
NEDD4P46934 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
NEDD4P46934 PAUPAR-201ENST00000630360 2965 ntBASIC18.82■□□□□ 0.6
NEDD4P46934 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.82■□□□□ 0.6
NEDD4P46934 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
NEDD4P46934 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.82■□□□□ 0.6
NEDD4P46934 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
NEDD4P46934 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.81■□□□□ 0.6
NEDD4P46934 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NEDD4P46934 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms