Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.78■□□□□ 0.44
CTGFP29279 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.78■□□□□ 0.44
CTGFP29279 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CTGFP29279 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.78■□□□□ 0.44
CTGFP29279 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.78■□□□□ 0.44
CTGFP29279 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
CTGFP29279 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTGFP29279 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.77■□□□□ 0.44
CTGFP29279 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.77■□□□□ 0.44
CTGFP29279 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.77■□□□□ 0.44
CTGFP29279 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.77■□□□□ 0.44
CTGFP29279 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CTGFP29279 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CTGFP29279 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.77■□□□□ 0.44
CTGFP29279 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.77■□□□□ 0.44
CTGFP29279 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.77■□□□□ 0.44
CTGFP29279 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.77■□□□□ 0.44
CTGFP29279 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.77■□□□□ 0.44
CTGFP29279 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC17.77■□□□□ 0.44
CTGFP29279 AP001505.2-201ENST00000616815 443 ntBASIC17.77■□□□□ 0.44
CTGFP29279 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
CTGFP29279 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTGFP29279 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.77■□□□□ 0.44
CTGFP29279 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17.77■□□□□ 0.44
CTGFP29279 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.77■□□□□ 0.44
CTGFP29279 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTGFP29279 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
CTGFP29279 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CTGFP29279 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.77■□□□□ 0.43
CTGFP29279 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.77■□□□□ 0.43
CTGFP29279 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTGFP29279 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.77■□□□□ 0.43
CTGFP29279 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CTGFP29279 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.77■□□□□ 0.43
CTGFP29279 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 RNU1-114P-201ENST00000365297 166 ntBASIC17.76■□□□□ 0.43
CTGFP29279 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.76■□□□□ 0.43
CTGFP29279 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 RN7SL720P-201ENST00000488178 304 ntBASIC17.76■□□□□ 0.43
CTGFP29279 AC245884.6-201ENST00000515672 1067 ntBASIC17.76■□□□□ 0.43
CTGFP29279 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
CTGFP29279 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
CTGFP29279 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 AC106820.2-201ENST00000563775 3264 ntBASIC17.76■□□□□ 0.43
CTGFP29279 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CTGFP29279 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.75■□□□□ 0.43
CTGFP29279 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.75■□□□□ 0.43
CTGFP29279 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CTGFP29279 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.75■□□□□ 0.43
CTGFP29279 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTGFP29279 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.75■□□□□ 0.43
CTGFP29279 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.75■□□□□ 0.43
CTGFP29279 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms