Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 CENPM-204ENST00000402420 688 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.15□□□□□ -0.3
DEFA4P12838 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.15□□□□□ -0.3
DEFA4P12838 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 KRT126P-201ENST00000549467 1181 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 AC012640.2-201ENST00000561606 901 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.15□□□□□ -0.3
DEFA4P12838 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.15□□□□□ -0.3
DEFA4P12838 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 AC010654.1-201ENST00000615722 808 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 AL031008.1-201ENST00000619963 541 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 AL031731.1-201ENST00000642131 2094 ntBASIC13.15□□□□□ -0.3
DEFA4P12838 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
DEFA4P12838 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
DEFA4P12838 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
DEFA4P12838 GGT3P-204ENST00000453783 1664 ntBASIC13.15□□□□□ -0.31
DEFA4P12838 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.15□□□□□ -0.31
DEFA4P12838 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
DEFA4P12838 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 AL512652.2-201ENST00000625156 1716 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 AL031284.1-201ENST00000419297 478 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 AC108751.1-201ENST00000490852 363 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.14□□□□□ -0.31
DEFA4P12838 AC148477.8-201ENST00000624298 468 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 AC117500.6-201ENST00000624871 588 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.14□□□□□ -0.31
DEFA4P12838 REXO1L8P-201ENST00000604378 1897 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 PCGF3-213ENST00000620529 1899 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
DEFA4P12838 PPT1-215ENST00000641471 2368 ntBASIC13.14□□□□□ -0.31
DEFA4P12838 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
DEFA4P12838 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
DEFA4P12838 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DEFA4P12838 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
DEFA4P12838 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DEFA4P12838 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.13□□□□□ -0.31
DEFA4P12838 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DEFA4P12838 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DEFA4P12838 AP005117.1-202ENST00000581724 1908 ntBASIC13.13□□□□□ -0.31
DEFA4P12838 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DEFA4P12838 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms