Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
BMP4P12644 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
BMP4P12644 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BMP4P12644 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BMP4P12644 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.84□□□□□ -0.03
BMP4P12644 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
BMP4P12644 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
BMP4P12644 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.84□□□□□ -0.03
BMP4P12644 AC097637.2-201ENST00000624096 1997 ntBASIC14.84□□□□□ -0.03
BMP4P12644 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.84□□□□□ -0.03
BMP4P12644 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BMP4P12644 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.83□□□□□ -0.03
BMP4P12644 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BMP4P12644 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
BMP4P12644 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
BMP4P12644 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
BMP4P12644 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
BMP4P12644 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 PRSS29P-201ENST00000440800 595 ntBASIC14.83□□□□□ -0.04
BMP4P12644 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
BMP4P12644 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 MIR4751-201ENST00000578027 74 ntBASIC14.83□□□□□ -0.04
BMP4P12644 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.83□□□□□ -0.04
BMP4P12644 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
BMP4P12644 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.83□□□□□ -0.04
BMP4P12644 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.83□□□□□ -0.04
BMP4P12644 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BMP4P12644 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 GPR89P-201ENST00000407924 1495 ntBASIC14.82□□□□□ -0.04
BMP4P12644 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.82□□□□□ -0.04
BMP4P12644 AC007967.2-201ENST00000432613 625 ntBASIC14.82□□□□□ -0.04
BMP4P12644 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
BMP4P12644 RPS15P9-201ENST00000494093 319 ntBASIC14.82□□□□□ -0.04
BMP4P12644 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.82□□□□□ -0.04
BMP4P12644 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.82□□□□□ -0.04
BMP4P12644 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 AC008667.4-201ENST00000607370 168 ntBASIC14.82□□□□□ -0.04
BMP4P12644 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 AC002310.6-201ENST00000624451 1377 ntBASIC14.82□□□□□ -0.04
BMP4P12644 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.82□□□□□ -0.04
BMP4P12644 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BMP4P12644 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BMP4P12644 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms