Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 METTL21AP1-201ENST00000438852 635 ntBASIC14.33□□□□□ -0.12
ERCC1P07992 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE11-202ENST00000450699 704 ntBASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.33□□□□□ -0.12
ERCC1P07992 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC1P07992 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE9P-201ENST00000570642 692 ntBASIC14.33□□□□□ -0.12
ERCC1P07992 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC1P07992 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE10P-202ENST00000612005 668 ntBASIC14.33□□□□□ -0.12
ERCC1P07992 SPDYE8P-202ENST00000612377 668 ntBASIC14.33□□□□□ -0.12
ERCC1P07992 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ERCC1P07992 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC1P07992 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC1P07992 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC1P07992 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC1P07992 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC1P07992 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.32□□□□□ -0.12
ERCC1P07992 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.32□□□□□ -0.12
ERCC1P07992 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC1P07992 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC1P07992 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC1P07992 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC1P07992 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC1P07992 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.31□□□□□ -0.12
ERCC1P07992 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.31□□□□□ -0.12
ERCC1P07992 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
ERCC1P07992 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC1P07992 MIR648-201ENST00000385046 94 ntBASIC14.31□□□□□ -0.12
ERCC1P07992 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms