Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.4□□□□□ -0.26
CTSDP07339 C18orf15-201ENST00000623680 2534 ntBASIC13.4□□□□□ -0.26
CTSDP07339 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
CTSDP07339 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CTSDP07339 CICP23-201ENST00000605013 2741 ntBASIC13.4□□□□□ -0.27
CTSDP07339 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CTSDP07339 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 MYO15B-237ENST00000642007 4893 ntBASIC13.39□□□□□ -0.27
CTSDP07339 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 HCG4P8-203ENST00000443049 980 ntBASIC13.39□□□□□ -0.27
CTSDP07339 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 RPS15P9-201ENST00000494093 319 ntBASIC13.39□□□□□ -0.27
CTSDP07339 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSDP07339 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.39□□□□□ -0.27
CTSDP07339 MIR3909-201ENST00000579518 119 ntBASIC13.39□□□□□ -0.27
CTSDP07339 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.39□□□□□ -0.27
CTSDP07339 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.27
CTSDP07339 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.39□□□□□ -0.27
CTSDP07339 AP001282.1-201ENST00000531301 1499 ntBASIC13.39□□□□□ -0.27
CTSDP07339 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CTSDP07339 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CTSDP07339 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.39□□□□□ -0.27
CTSDP07339 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.39□□□□□ -0.27
CTSDP07339 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CTSDP07339 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CTSDP07339 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CTSDP07339 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 RNU1-129P-201ENST00000384064 167 ntBASIC13.38□□□□□ -0.27
CTSDP07339 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 AC093724.1-201ENST00000448659 1027 ntBASIC13.38□□□□□ -0.27
CTSDP07339 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.38□□□□□ -0.27
CTSDP07339 SART3-203ENST00000546611 1184 ntBASIC13.38□□□□□ -0.27
CTSDP07339 U1.21-201ENST00000580816 167 ntBASIC13.38□□□□□ -0.27
CTSDP07339 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 AL355877.3-201ENST00000622820 899 ntBASIC13.38□□□□□ -0.27
CTSDP07339 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
CTSDP07339 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.38□□□□□ -0.27
CTSDP07339 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CTSDP07339 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CTSDP07339 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms