Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HLA-DQB2P05538 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 KRT18P28-201ENST00000453838 1332 ntBASIC16.26■□□□□ 0.19
HLA-DQB2P05538 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 CNN2P2-201ENST00000443536 909 ntBASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 CNN2P3-201ENST00000450201 906 ntBASIC16.26■□□□□ 0.19
HLA-DQB2P05538 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AL136317.3-201ENST00000618497 906 ntBASIC16.26■□□□□ 0.19
HLA-DQB2P05538 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HLA-DQB2P05538 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 TUBB3P1-201ENST00000405796 1332 ntBASIC16.25■□□□□ 0.19
HLA-DQB2P05538 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AZGP1P1-201ENST00000411909 902 ntBASIC16.25■□□□□ 0.19
HLA-DQB2P05538 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AC025678.2-201ENST00000562061 970 ntBASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 AC105917.1-201ENST00000506637 2539 ntBASIC16.25■□□□□ 0.19
HLA-DQB2P05538 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HLA-DQB2P05538 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.24■□□□□ 0.19
HLA-DQB2P05538 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HLA-DQB2P05538 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms