Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.19■□□□□ 0.66
POLR3DP05423 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR3DP05423 AC004840.1-201ENST00000636359 365 ntBASIC19.19■□□□□ 0.66
POLR3DP05423 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR3DP05423 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
POLR3DP05423 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.19■□□□□ 0.66
POLR3DP05423 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.19■□□□□ 0.66
POLR3DP05423 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
POLR3DP05423 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3DP05423 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
POLR3DP05423 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 AC044860.1-202ENST00000559481 777 ntBASIC19.18■□□□□ 0.66
POLR3DP05423 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.18■□□□□ 0.66
POLR3DP05423 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
POLR3DP05423 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.18■□□□□ 0.66
POLR3DP05423 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
POLR3DP05423 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
POLR3DP05423 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3DP05423 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR3DP05423 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
POLR3DP05423 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
POLR3DP05423 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
POLR3DP05423 PIN1P1-201ENST00000412108 996 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 SPTLC1P1-201ENST00000447199 261 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR3DP05423 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.17■□□□□ 0.66
POLR3DP05423 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
POLR3DP05423 MIR6069-201ENST00000620069 79 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 AF228730.6-201ENST00000641497 218 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 AC084121.3-201ENST00000641716 218 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 AC105233.6-201ENST00000642093 218 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 CYP4F24P-201ENST00000586049 1580 ntBASIC19.17■□□□□ 0.66
POLR3DP05423 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR3DP05423 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.17■□□□□ 0.66
POLR3DP05423 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
POLR3DP05423 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
POLR3DP05423 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
POLR3DP05423 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3DP05423 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.16■□□□□ 0.66
POLR3DP05423 CICP6-201ENST00000457191 2729 ntBASIC19.16■□□□□ 0.66
POLR3DP05423 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
POLR3DP05423 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
POLR3DP05423 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms