Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CAPNS1P04632 AC013268.4-201ENST00000637413 2228 ntBASIC16.01■□□□□ 0.15
CAPNS1P04632 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.01■□□□□ 0.15
CAPNS1P04632 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.01■□□□□ 0.15
CAPNS1P04632 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 AC109635.5-201ENST00000533593 962 ntBASIC16.01■□□□□ 0.15
CAPNS1P04632 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.01■□□□□ 0.15
CAPNS1P04632 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CAPNS1P04632 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CAPNS1P04632 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CAPNS1P04632 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CAPNS1P04632 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CAPNS1P04632 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
CAPNS1P04632 AL133338.1-201ENST00000565695 1517 ntBASIC16■□□□□ 0.15
CAPNS1P04632 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 AC119751.2-201ENST00000504529 210 ntBASIC16■□□□□ 0.15
CAPNS1P04632 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16■□□□□ 0.15
CAPNS1P04632 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
CAPNS1P04632 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16■□□□□ 0.15
CAPNS1P04632 AC008738.7-201ENST00000609744 511 ntBASIC16■□□□□ 0.15
CAPNS1P04632 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16■□□□□ 0.15
CAPNS1P04632 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16■□□□□ 0.15
CAPNS1P04632 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CAPNS1P04632 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16■□□□□ 0.15
CAPNS1P04632 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CAPNS1P04632 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.99■□□□□ 0.15
CAPNS1P04632 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CAPNS1P04632 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms