Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 AC079776.1-201ENST00000401540 1152 ntBASIC15.09■□□□□ 0.01
PDGFAP04085 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 DFFBP1-201ENST00000433250 979 ntBASIC15.09■□□□□ 0.01
PDGFAP04085 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.09■□□□□ 0.01
PDGFAP04085 RNA5SP410-201ENST00000516285 106 ntBASIC15.09■□□□□ 0.01
PDGFAP04085 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 AL512361.1-201ENST00000554200 418 ntBASIC15.09■□□□□ 0.01
PDGFAP04085 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.09■□□□□ 0.01
PDGFAP04085 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
PDGFAP04085 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PDGFAP04085 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.09■□□□□ 0.01
PDGFAP04085 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDGFAP04085 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PDGFAP04085 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PDGFAP04085 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDGFAP04085 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.08■□□□□ 0.01
PDGFAP04085 AL603756.1-201ENST00000606511 2163 ntBASIC15.08■□□□□ 0.01
PDGFAP04085 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDGFAP04085 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDGFAP04085 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 SPDYE19P-201ENST00000338590 713 ntBASIC15.08■□□□□ 0
PDGFAP04085 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 AL512384.1-201ENST00000406683 331 ntBASIC15.08■□□□□ 0
PDGFAP04085 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.08■□□□□ 0
PDGFAP04085 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 RN7SL752P-201ENST00000463779 287 ntBASIC15.08■□□□□ 0
PDGFAP04085 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 AC098859.1-201ENST00000502915 1238 ntBASIC15.08■□□□□ 0
PDGFAP04085 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
PDGFAP04085 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.08■□□□□ 0
PDGFAP04085 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.08■□□□□ 0
PDGFAP04085 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.08■□□□□ 0
PDGFAP04085 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 AC024909.3-201ENST00000611513 2257 ntBASIC15.08■□□□□ 0
PDGFAP04085 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDGFAP04085 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.08■□□□□ 0
PDGFAP04085 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDGFAP04085 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PDGFAP04085 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDGFAP04085 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.07■□□□□ 0
PDGFAP04085 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms