Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
VTNP04004 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
VTNP04004 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
VTNP04004 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.5■□□□□ 0.39
VTNP04004 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
VTNP04004 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.5■□□□□ 0.39
VTNP04004 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.5■□□□□ 0.39
VTNP04004 AL450472.2-201ENST00000603663 1156 ntBASIC17.5■□□□□ 0.39
VTNP04004 AL391069.4-201ENST00000609583 481 ntBASIC17.5■□□□□ 0.39
VTNP04004 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.5■□□□□ 0.39
VTNP04004 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
VTNP04004 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VTNP04004 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.5■□□□□ 0.39
VTNP04004 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VTNP04004 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
VTNP04004 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 RN7SL399P-201ENST00000471648 279 ntBASIC17.49■□□□□ 0.39
VTNP04004 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.49■□□□□ 0.39
VTNP04004 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.49■□□□□ 0.39
VTNP04004 HNRNPUP1-201ENST00000554987 333 ntBASIC17.49■□□□□ 0.39
VTNP04004 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.49■□□□□ 0.39
VTNP04004 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.49■□□□□ 0.39
VTNP04004 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
VTNP04004 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.48■□□□□ 0.39
VTNP04004 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
VTNP04004 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
VTNP04004 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms