Protein–RNA interactions for Protein: P01911

HLA-DRB1, HLA class II histocompatibility antigen, DRB1-15 beta chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1P01911 SPTSSB-204ENST00000617024 1292 ntBASIC12.97□□□□□ -0.33
HLA-DRB1P01911 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
HLA-DRB1P01911 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC004461.1-201ENST00000412461 403 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC005237.2-201ENST00000434368 219 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC069335.1-201ENST00000489972 472 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC024267.1-201ENST00000582320 895 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 AC079781.4-201ENST00000641908 219 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 UXT-AS1-201ENST00000590504 1525 ntBASIC12.96□□□□□ -0.33
HLA-DRB1P01911 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
HLA-DRB1P01911 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 TCAF2P1-201ENST00000291129 2421 ntBASIC12.96□□□□□ -0.34
HLA-DRB1P01911 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
HLA-DRB1P01911 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 AC132872.4-202ENST00000622924 2756 ntBASIC12.95□□□□□ -0.34
HLA-DRB1P01911 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
HLA-DRB1P01911 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms