Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.25■□□□□ 0.35
HLA-DRAP01903 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HLA-DRAP01903 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 PAUPAR-201ENST00000630360 2965 ntBASIC17.24■□□□□ 0.35
HLA-DRAP01903 CETN4P-206ENST00000642099 2168 ntBASIC17.24■□□□□ 0.35
HLA-DRAP01903 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 AC107890.1-201ENST00000422478 521 ntBASIC17.24■□□□□ 0.35
HLA-DRAP01903 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 KRT8P12-202ENST00000472924 1397 ntBASIC17.24■□□□□ 0.35
HLA-DRAP01903 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.24■□□□□ 0.35
HLA-DRAP01903 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HLA-DRAP01903 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 AZGP1P1-201ENST00000411909 902 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 AL080243.2-201ENST00000418783 582 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 AL645939.2-201ENST00000427340 991 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 AC140878.1-201ENST00000565277 250 ntBASIC17.23■□□□□ 0.35
HLA-DRAP01903 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.23■□□□□ 0.35
HLA-DRAP01903 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HLA-DRAP01903 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HLA-DRAP01903 RPL37AP1-201ENST00000412502 279 ntBASIC17.22■□□□□ 0.35
HLA-DRAP01903 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.22■□□□□ 0.35
HLA-DRAP01903 HIST3H2BA-201ENST00000436555 524 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms