Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GGPS1O95749 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
GGPS1O95749 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 ELK1P1-201ENST00000485699 580 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 GIMAP3P-201ENST00000495150 836 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.96■□□□□ 0.47
GGPS1O95749 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.96■□□□□ 0.47
GGPS1O95749 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.96■□□□□ 0.47
GGPS1O95749 AC132938.2-201ENST00000579188 680 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 CTBP2P3-201ENST00000585629 1255 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 AC093726.1-201ENST00000608064 963 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 AL591163.1-201ENST00000641757 987 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.96■□□□□ 0.47
GGPS1O95749 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GGPS1O95749 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.96■□□□□ 0.47
GGPS1O95749 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.96■□□□□ 0.47
GGPS1O95749 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GGPS1O95749 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GGPS1O95749 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
GGPS1O95749 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
GGPS1O95749 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
GGPS1O95749 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GGPS1O95749 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.95■□□□□ 0.46
GGPS1O95749 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 AL512384.1-201ENST00000406683 331 ntBASIC17.95■□□□□ 0.46
GGPS1O95749 U91328.1-201ENST00000437528 223 ntBASIC17.95■□□□□ 0.46
GGPS1O95749 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.95■□□□□ 0.46
GGPS1O95749 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
GGPS1O95749 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.95■□□□□ 0.46
GGPS1O95749 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.95■□□□□ 0.46
GGPS1O95749 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.95■□□□□ 0.46
GGPS1O95749 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.95■□□□□ 0.46
GGPS1O95749 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.95■□□□□ 0.46
GGPS1O95749 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
GGPS1O95749 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
GGPS1O95749 CYP2T1P-202ENST00000641596 2535 ntBASIC17.95■□□□□ 0.46
GGPS1O95749 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
GGPS1O95749 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AC079328.2-201ENST00000561241 3354 ntBASIC17.94■□□□□ 0.46
GGPS1O95749 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.94■□□□□ 0.46
GGPS1O95749 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AC006449.5-201ENST00000610658 2098 ntBASIC17.94■□□□□ 0.46
GGPS1O95749 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AC011495.1-201ENST00000498085 584 ntBASIC17.94■□□□□ 0.46
GGPS1O95749 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.94■□□□□ 0.46
GGPS1O95749 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.94■□□□□ 0.46
GGPS1O95749 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.94■□□□□ 0.46
GGPS1O95749 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
GGPS1O95749 RARRES2P5-201ENST00000564013 466 ntBASIC17.94■□□□□ 0.46
GGPS1O95749 RRP7BP-205ENST00000566851 833 ntBASIC17.94■□□□□ 0.46
GGPS1O95749 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
GGPS1O95749 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
GGPS1O95749 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.94■□□□□ 0.46
GGPS1O95749 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
GGPS1O95749 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms