Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST1O76090 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.79■□□□□ 0.28
BEST1O76090 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.79■□□□□ 0.28
BEST1O76090 AL450472.2-201ENST00000603663 1156 ntBASIC16.79■□□□□ 0.28
BEST1O76090 AC009118.2-201ENST00000613275 655 ntBASIC16.79■□□□□ 0.28
BEST1O76090 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
BEST1O76090 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
BEST1O76090 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
BEST1O76090 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.78■□□□□ 0.28
BEST1O76090 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
BEST1O76090 AF228730.6-201ENST00000641497 218 ntBASIC16.78■□□□□ 0.28
BEST1O76090 AC084121.3-201ENST00000641716 218 ntBASIC16.78■□□□□ 0.28
BEST1O76090 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
BEST1O76090 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
BEST1O76090 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
BEST1O76090 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.77■□□□□ 0.28
BEST1O76090 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
BEST1O76090 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BEST1O76090 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
BEST1O76090 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST1O76090 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
BEST1O76090 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST1O76090 TERF1P3-201ENST00000505638 1227 ntBASIC16.77■□□□□ 0.28
BEST1O76090 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST1O76090 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST1O76090 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.77■□□□□ 0.28
BEST1O76090 SRD5A3P1-201ENST00000603021 949 ntBASIC16.77■□□□□ 0.28
BEST1O76090 AC074044.1-201ENST00000609673 707 ntBASIC16.77■□□□□ 0.28
BEST1O76090 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
BEST1O76090 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
BEST1O76090 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
BEST1O76090 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
BEST1O76090 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.77■□□□□ 0.27
BEST1O76090 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST1O76090 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST1O76090 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
BEST1O76090 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.27
BEST1O76090 AL607033.1-201ENST00000623900 1599 ntBASIC16.77■□□□□ 0.27
BEST1O76090 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
BEST1O76090 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.76■□□□□ 0.27
BEST1O76090 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms