Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN11O75508 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN11O75508 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLDN11O75508 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN11O75508 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN11O75508 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.36■□□□□ 0.21
CLDN11O75508 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLDN11O75508 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN11O75508 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLDN11O75508 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 AC124067.4-201ENST00000519691 2379 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN11O75508 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 AC002472.2-201ENST00000442739 958 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.35■□□□□ 0.21
CLDN11O75508 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN11O75508 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
CLDN11O75508 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CLDN11O75508 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 LINC02560-201ENST00000596379 459 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 AC008761.3-201ENST00000624803 892 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 AC004840.1-201ENST00000636359 365 ntBASIC16.35■□□□□ 0.21
CLDN11O75508 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.35■□□□□ 0.21
CLDN11O75508 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN11O75508 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN11O75508 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 AL603832.2-201ENST00000566195 2125 ntBASIC16.34■□□□□ 0.21
CLDN11O75508 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
CLDN11O75508 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 AC236430.1-201ENST00000402231 743 ntBASIC16.34■□□□□ 0.21
CLDN11O75508 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN11O75508 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CLDN11O75508 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CLDN11O75508 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN11O75508 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN11O75508 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN11O75508 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN11O75508 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN11O75508 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN11O75508 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
CLDN11O75508 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN11O75508 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN11O75508 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
CLDN11O75508 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.33■□□□□ 0.2
CLDN11O75508 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN11O75508 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN11O75508 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms