Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
HCN1O60741 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.1■□□□□ 0.01
HCN1O60741 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.1■□□□□ 0.01
HCN1O60741 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 AC093028.1-201ENST00000622998 982 ntBASIC15.1■□□□□ 0.01
HCN1O60741 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.1■□□□□ 0.01
HCN1O60741 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HCN1O60741 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
HCN1O60741 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
HCN1O60741 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.09■□□□□ 0.01
HCN1O60741 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 HMGN1P19-201ENST00000436976 333 ntBASIC15.09■□□□□ 0.01
HCN1O60741 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 POU5F1P6-201ENST00000466990 990 ntBASIC15.09■□□□□ 0.01
HCN1O60741 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.09■□□□□ 0.01
HCN1O60741 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.09■□□□□ 0.01
HCN1O60741 AC093520.2-201ENST00000561830 333 ntBASIC15.09■□□□□ 0.01
HCN1O60741 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.09■□□□□ 0.01
HCN1O60741 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.09■□□□□ 0.01
HCN1O60741 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.09■□□□□ 0.01
HCN1O60741 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.09■□□□□ 0.01
HCN1O60741 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 LINC01144-201ENST00000626198 1710 ntBASIC15.09■□□□□ 0.01
HCN1O60741 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
HCN1O60741 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCN1O60741 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.08■□□□□ 0.01
HCN1O60741 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCN1O60741 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
HCN1O60741 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCN1O60741 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
HCN1O60741 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms