Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 NUS1P2-201ENST00000417358 873 ntBASIC13.17□□□□□ -0.3
SSSCA1O60232 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 TSSC2-201ENST00000450217 709 ntBASIC13.17□□□□□ -0.3
SSSCA1O60232 SLC25A6P2-201ENST00000497974 877 ntBASIC13.17□□□□□ -0.3
SSSCA1O60232 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.17□□□□□ -0.3
SSSCA1O60232 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.17□□□□□ -0.3
SSSCA1O60232 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SSSCA1O60232 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SSSCA1O60232 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 AC138969.2-201ENST00000532739 9932 ntBASIC13.17□□□□□ -0.3
SSSCA1O60232 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.17□□□□□ -0.3
SSSCA1O60232 AC091951.1-201ENST00000512854 2465 ntBASIC13.17□□□□□ -0.3
SSSCA1O60232 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC13.17□□□□□ -0.3
SSSCA1O60232 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SSSCA1O60232 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SSSCA1O60232 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SSSCA1O60232 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 ARMC10P1-201ENST00000313754 855 ntBASIC13.16□□□□□ -0.3
SSSCA1O60232 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 HAUS4P1-201ENST00000406739 1145 ntBASIC13.16□□□□□ -0.3
SSSCA1O60232 HCG4-201ENST00000418983 998 ntBASIC13.16□□□□□ -0.3
SSSCA1O60232 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.16□□□□□ -0.3
SSSCA1O60232 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 AP002414.4-201ENST00000589764 1148 ntBASIC13.16□□□□□ -0.3
SSSCA1O60232 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 AL589182.2-201ENST00000619332 1049 ntBASIC13.16□□□□□ -0.3
SSSCA1O60232 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SSSCA1O60232 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SSSCA1O60232 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SSSCA1O60232 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.15□□□□□ -0.3
SSSCA1O60232 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms