Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 AL845331.1-201ENST00000424978 1190 ntBASIC12.51□□□□□ -0.41
PDE6DO43924 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.51□□□□□ -0.41
PDE6DO43924 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.51□□□□□ -0.41
PDE6DO43924 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
PDE6DO43924 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.51□□□□□ -0.41
PDE6DO43924 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
PDE6DO43924 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.51□□□□□ -0.41
PDE6DO43924 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
PDE6DO43924 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
PDE6DO43924 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 CCS-201ENST00000310190 942 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.5□□□□□ -0.41
PDE6DO43924 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.5□□□□□ -0.41
PDE6DO43924 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.5□□□□□ -0.41
PDE6DO43924 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 VENTXP5-201ENST00000523979 775 ntBASIC12.5□□□□□ -0.41
PDE6DO43924 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 COPE-211ENST00000600932 1144 ntTSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 AL353135.1-201ENST00000606729 504 ntBASIC12.5□□□□□ -0.41
PDE6DO43924 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
PDE6DO43924 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.5□□□□□ -0.41
PDE6DO43924 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.5□□□□□ -0.41
PDE6DO43924 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
PDE6DO43924 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms