Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 CYP4F24P-201ENST00000586049 1580 ntBASIC14.32□□□□□ -0.12
TRAF3IP2O43734 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AL353705.2-201ENST00000428243 662 ntBASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AP001059.3-201ENST00000619053 235 ntBASIC14.32□□□□□ -0.12
TRAF3IP2O43734 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAF3IP2O43734 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AC004987.2-201ENST00000395959 1148 ntBASIC14.31□□□□□ -0.12
TRAF3IP2O43734 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAF3IP2O43734 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 PAUPAR-201ENST00000630360 2965 ntBASIC14.3□□□□□ -0.12
TRAF3IP2O43734 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAF3IP2O43734 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms