Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 AL355306.1-201ENST00000415580 579 ntBASIC14.3□□□□□ -0.12
SGCEO43556 AC004832.2-201ENST00000426397 482 ntBASIC14.3□□□□□ -0.12
SGCEO43556 AL671277.1-201ENST00000429656 993 ntBASIC14.3□□□□□ -0.12
SGCEO43556 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.3□□□□□ -0.12
SGCEO43556 FAM86C2P-203ENST00000528684 1004 ntBASIC14.3□□□□□ -0.12
SGCEO43556 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.3□□□□□ -0.12
SGCEO43556 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.3□□□□□ -0.12
SGCEO43556 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.3□□□□□ -0.12
SGCEO43556 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.3□□□□□ -0.12
SGCEO43556 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SGCEO43556 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.29□□□□□ -0.12
SGCEO43556 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 AC007950.2-201ENST00000615045 2347 ntBASIC14.29□□□□□ -0.12
SGCEO43556 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 MIR648-201ENST00000385046 94 ntBASIC14.29□□□□□ -0.12
SGCEO43556 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.29□□□□□ -0.12
SGCEO43556 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
SGCEO43556 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.29□□□□□ -0.12
SGCEO43556 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.29□□□□□ -0.12
SGCEO43556 MTDHP5-201ENST00000598980 586 ntBASIC14.29□□□□□ -0.12
SGCEO43556 AL365330.1-201ENST00000607459 531 ntBASIC14.29□□□□□ -0.12
SGCEO43556 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.29□□□□□ -0.12
SGCEO43556 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.29□□□□□ -0.12
SGCEO43556 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SGCEO43556 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.29□□□□□ -0.12
SGCEO43556 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SGCEO43556 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.28□□□□□ -0.12
SGCEO43556 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.28□□□□□ -0.12
SGCEO43556 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SGCEO43556 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms