Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 AL592424.1-201ENST00000563624 1536 ntBASIC11.05□□□□□ -0.64
NDUFA1O15239 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
NDUFA1O15239 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 TPM1-218ENST00000559281 851 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.05□□□□□ -0.64
NDUFA1O15239 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.05□□□□□ -0.64
NDUFA1O15239 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 AL732292.2-201ENST00000609649 430 ntBASIC11.05□□□□□ -0.64
NDUFA1O15239 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PI4KAP1-204ENST00000612579 1703 ntBASIC11.05□□□□□ -0.64
NDUFA1O15239 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 AC067750.1-201ENST00000608826 6545 ntBASIC11.05□□□□□ -0.64
NDUFA1O15239 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
NDUFA1O15239 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC11.05□□□□□ -0.64
NDUFA1O15239 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.04□□□□□ -0.64
NDUFA1O15239 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 POR-201ENST00000394893 2532 ntTSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 KRT18P35-201ENST00000510488 1269 ntBASIC11.04□□□□□ -0.64
NDUFA1O15239 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.04□□□□□ -0.64
NDUFA1O15239 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.04□□□□□ -0.64
NDUFA1O15239 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC006557.2-201ENST00000592985 1240 ntBASIC11.04□□□□□ -0.64
NDUFA1O15239 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC008608.2-201ENST00000606089 416 ntBASIC11.04□□□□□ -0.64
NDUFA1O15239 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
NDUFA1O15239 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.04□□□□□ -0.64
NDUFA1O15239 AC106881.1-201ENST00000605849 3329 ntBASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms