Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CASQ2O14958 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.32■□□□□ 0.04
CASQ2O14958 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.31■□□□□ 0.04
CASQ2O14958 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.31■□□□□ 0.04
CASQ2O14958 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 OS9-204ENST00000389146 2091 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 STARP1-201ENST00000397973 869 ntBASIC15.31■□□□□ 0.04
CASQ2O14958 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.31■□□□□ 0.04
CASQ2O14958 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
CASQ2O14958 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.31■□□□□ 0.04
CASQ2O14958 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 AL023973.1-201ENST00000624619 620 ntBASIC15.31■□□□□ 0.04
CASQ2O14958 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CASQ2O14958 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 Z83836.1-201ENST00000624605 1642 ntBASIC15.31■□□□□ 0.04
CASQ2O14958 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.31■□□□□ 0.04
CASQ2O14958 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CASQ2O14958 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.31■□□□□ 0.04
CASQ2O14958 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CASQ2O14958 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 CICP14-201ENST00000629111 2732 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.3■□□□□ 0.04
CASQ2O14958 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.3■□□□□ 0.04
CASQ2O14958 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.3■□□□□ 0.04
CASQ2O14958 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.3■□□□□ 0.04
CASQ2O14958 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 LINC00982-205ENST00000420957 435 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 AL845331.1-201ENST00000424978 1190 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CASQ2O14958 RN7SL606P-201ENST00000472779 293 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.3■□□□□ 0.04
CASQ2O14958 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
CASQ2O14958 AJ011931.1-201ENST00000618749 2492 ntBASIC15.3■□□□□ 0.04
CASQ2O14958 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CASQ2O14958 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.3■□□□□ 0.04
CASQ2O14958 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CASQ2O14958 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CASQ2O14958 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
CASQ2O14958 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CASQ2O14958 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
CASQ2O14958 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CASQ2O14958 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms