Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN5O00501 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.9■□□□□ 0.3
CLDN5O00501 ZNF890P-202ENST00000530367 1156 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN5O00501 AC104794.3-201ENST00000566840 1248 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 AC025048.3-201ENST00000590609 569 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CLDN5O00501 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 AC005702.4-201ENST00000618393 416 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 AC004461.2-201ENST00000629517 803 ntBASIC16.9■□□□□ 0.3
CLDN5O00501 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN5O00501 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CLDN5O00501 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CLDN5O00501 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN5O00501 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.89■□□□□ 0.29
CLDN5O00501 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN5O00501 LINC02447-202ENST00000501888 2146 ntBASIC16.89■□□□□ 0.29
CLDN5O00501 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN5O00501 SDHAP3-202ENST00000515467 728 ntBASIC16.89■□□□□ 0.29
CLDN5O00501 AL603832.2-201ENST00000566195 2125 ntBASIC16.89■□□□□ 0.29
CLDN5O00501 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN5O00501 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.89■□□□□ 0.29
CLDN5O00501 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN5O00501 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.89■□□□□ 0.29
CLDN5O00501 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN5O00501 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN5O00501 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 DOC2GP-204ENST00000639052 2548 ntBASIC16.88■□□□□ 0.29
CLDN5O00501 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 SPTLC1P1-201ENST00000447199 261 ntBASIC16.88■□□□□ 0.29
CLDN5O00501 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN5O00501 AL589987.1-201ENST00000453380 819 ntBASIC16.88■□□□□ 0.29
CLDN5O00501 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 TERF1P3-201ENST00000505638 1227 ntBASIC16.88■□□□□ 0.29
CLDN5O00501 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.88■□□□□ 0.29
CLDN5O00501 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
CLDN5O00501 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLDN5O00501 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.88■□□□□ 0.29
CLDN5O00501 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLDN5O00501 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN5O00501 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
CLDN5O00501 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN5O00501 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN5O00501 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLDN5O00501 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms