Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ITM2C-210ENST00000620962 501 ntBASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TRIM80P-201ENST00000455685 2848 ntBASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KRT16P1-201ENST00000399124 1418 ntBASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GPR89P-201ENST00000407924 1495 ntBASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.06□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC130686.1-201ENST00000622936 2466 ntBASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 MIR648-201ENST00000385046 94 ntBASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.05□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BEND3P3-201ENST00000611030 2440 ntBASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
BOLA2-SMG1P6H3BVE0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms