Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.77■□□□□ 0.75
RGPD3A6NKT7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC009779.1-201ENST00000551138 283 ntBASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC087045.2-201ENST00000606279 1003 ntBASIC19.76■□□□□ 0.75
RGPD3A6NKT7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AL603764.1-201ENST00000636452 321 ntBASIC19.76■□□□□ 0.75
RGPD3A6NKT7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AC060834.1-201ENST00000443027 2032 ntBASIC19.76■□□□□ 0.75
RGPD3A6NKT7 AL157791.1-201ENST00000553667 1699 ntBASIC19.75■□□□□ 0.75
RGPD3A6NKT7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AC092171.5-201ENST00000608012 942 ntBASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AL136295.7-201ENST00000619226 1200 ntBASIC19.75■□□□□ 0.75
RGPD3A6NKT7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AC073150.1-201ENST00000450406 1084 ntBASIC19.75■□□□□ 0.75
RGPD3A6NKT7 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AC242376.2-201ENST00000619355 883 ntBASIC19.75■□□□□ 0.75
RGPD3A6NKT7 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.75■□□□□ 0.75
RGPD3A6NKT7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 RCC2P8-201ENST00000502779 1035 ntBASIC19.74■□□□□ 0.75
RGPD3A6NKT7 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 DNM1P30-201ENST00000563586 452 ntBASIC19.74■□□□□ 0.75
RGPD3A6NKT7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 RPL17P45-201ENST00000586289 509 ntBASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC009955.4-201ENST00000597192 544 ntBASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 AC007881.3-201ENST00000608897 607 ntBASIC19.74■□□□□ 0.75
RGPD3A6NKT7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RGPD3A6NKT7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 KRT8P4-201ENST00000509735 1454 ntBASIC19.73■□□□□ 0.75
RGPD3A6NKT7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 AL645937.2-201ENST00000396808 931 ntBASIC19.73■□□□□ 0.75
RGPD3A6NKT7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.73■□□□□ 0.75
RGPD3A6NKT7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms