Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 NUDT16P1-203ENST00000513809 620 ntBASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 AC027601.5-201ENST00000624065 2482 ntBASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAPPC1Q9Y5R8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AL928921.2-201ENST00000641325 2442 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 KRT8P10-201ENST00000450021 1447 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SNX33P1-201ENST00000592116 1762 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AC103564.2-201ENST00000432853 1299 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AL138781.1-201ENST00000566567 1274 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 AL157888.1-201ENST00000631930 593 ntBASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
TRAPPC1Q9Y5R8 DGCR9-201ENST00000609630 2415 ntBASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TRAPPC1Q9Y5R8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.2□□□□□ -0.46
TRAPPC1Q9Y5R8 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms