Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 AC105339.1-204ENST00000636249 355 ntBASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 BNIP3P1-202ENST00000550043 1585 ntBASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TCAF1Q9Y4C2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 YBX1P5-201ENST00000509441 847 ntBASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 AP3S2-216ENST00000617003 1561 ntBASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TCAF1Q9Y4C2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TCAF1Q9Y4C2 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 AL136982.4-201ENST00000437689 1740 ntBASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 AC004987.2-201ENST00000395959 1148 ntBASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 MIR4469-201ENST00000583919 79 ntBASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TCAF1Q9Y4C2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms