Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC078925.2-201ENST00000624013 1973 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC007541.1-201ENST00000570282 1469 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 HLA-V-201ENST00000429037 534 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 TEX28P1-201ENST00000613479 1221 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 TEX28P2-201ENST00000617764 1221 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CETN4P-206ENST00000642099 2168 ntBASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SATB2Q9UPW6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 FOXO1B-201ENST00000504678 1527 ntBASIC15.79■□□□□ 0.12
SATB2Q9UPW6 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AC009407.1-201ENST00000568958 598 ntBASIC15.79■□□□□ 0.12
SATB2Q9UPW6 TP53TG3HP-202ENST00000569755 579 ntBASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AL589739.1-201ENST00000607720 493 ntBASIC15.79■□□□□ 0.12
SATB2Q9UPW6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SATB2Q9UPW6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms