Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 GGTLC4P-201ENST00000402176 664 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 HNRNPA1P25-201ENST00000422644 937 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 MIR181D-201ENST00000384853 137 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 VGLL1-201ENST00000370634 1215 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 CHCHD2P9-201ENST00000461726 456 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC010551.3-201ENST00000563772 463 ntTSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 RPL4P6-201ENST00000438116 1304 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 MIR4783-201ENST00000580343 82 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 AC140113.1-201ENST00000603467 169 ntBASIC6.37□□□□□ -1.39
MACF1Q9UPN3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
MACF1Q9UPN3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AP000358.1-201ENST00000456260 156 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 MIR3180-2-201ENST00000581748 88 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 MIR6749-201ENST00000617008 69 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 KRT8P4-201ENST00000509735 1454 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 EEF1DP5-201ENST00000431410 772 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 MYL6-215ENST00000549566 685 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 SNORD3B-2-202ENST00000571722 791 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC6.36□□□□□ -1.39
MACF1Q9UPN3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms