Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 AC027369.6-201ENST00000525520 931 ntBASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHA4Q9UN74 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 AC008741.2-201ENST00000612792 3115 ntBASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHA4Q9UN74 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 AL033527.5-202ENST00000641632 1098 ntBASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PCDHA4Q9UN74 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHA4Q9UN74 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms