Protein–RNA interactions for Protein: Q9UBY8

CLN8, Protein CLN8, humanhuman

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8Q9UBY8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLN8Q9UBY8 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 MTHFR-217ENST00000641820 1569 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CNN2P2-201ENST00000443536 909 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CNN2P3-201ENST00000450201 906 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 AC109322.1-201ENST00000524499 1264 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ALG1L8P-201ENST00000533887 760 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 AL136317.3-201ENST00000618497 906 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 AP001059.3-201ENST00000619053 235 ntBASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CLN8Q9UBY8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC105917.1-201ENST00000506637 2539 ntBASIC13.65□□□□□ -0.22
CLN8Q9UBY8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC142381.1-201ENST00000426099 345 ntBASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC067863.1-201ENST00000494933 530 ntBASIC13.65□□□□□ -0.22
CLN8Q9UBY8 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC027796.2-201ENST00000575326 344 ntBASIC13.65□□□□□ -0.22
CLN8Q9UBY8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC106028.4-201ENST00000614509 607 ntBASIC13.65□□□□□ -0.22
CLN8Q9UBY8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CLN8Q9UBY8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms