Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NKX6-2Q9C056 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NKX6-2Q9C056 AC140479.7-201ENST00000636301 2332 ntBASIC13.08□□□□□ -0.31
NKX6-2Q9C056 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-2Q9C056 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-2Q9C056 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-2Q9C056 AL021920.2-201ENST00000624828 1351 ntBASIC13.08□□□□□ -0.31
NKX6-2Q9C056 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
NKX6-2Q9C056 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX6-2Q9C056 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms