Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
LCE3DQ9BYE3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AL031731.1-201ENST00000642131 2094 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AC023908.3-201ENST00000564211 3047 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PTPRVP-205ENST00000641549 5067 ntBASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC4.36□□□□□ -1.71
LCE3DQ9BYE3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms