Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ARID3AQ99856 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
ARID3AQ99856 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ARID3AQ99856 MRPL3P1-201ENST00000400109 1033 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 ELK2BP-201ENST00000415014 1224 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 KRT18P67-201ENST00000432816 1264 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 AC009078.2-202ENST00000463353 338 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ARID3AQ99856 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ARID3AQ99856 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.43■□□□□ 0.54
ARID3AQ99856 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 AC012640.2-201ENST00000561606 901 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.43■□□□□ 0.54
ARID3AQ99856 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 AL139424.1-201ENST00000607572 797 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 AC107918.4-202ENST00000641623 219 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.43■□□□□ 0.54
ARID3AQ99856 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.43■□□□□ 0.54
ARID3AQ99856 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
ARID3AQ99856 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.43■□□□□ 0.54
ARID3AQ99856 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARID3AQ99856 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 AC006504.4-201ENST00000592118 1568 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.42■□□□□ 0.54
ARID3AQ99856 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
ARID3AQ99856 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARID3AQ99856 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARID3AQ99856 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.42■□□□□ 0.54
ARID3AQ99856 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AL160237.2-201ENST00000556165 472 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AC139887.3-201ENST00000568585 713 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AL049840.3-201ENST00000602669 611 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 AC004706.3-202ENST00000621574 984 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 FRMD8P1-201ENST00000440433 1524 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC18.42■□□□□ 0.54
ARID3AQ99856 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
ARID3AQ99856 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 PCDHA3-202ENST00000532566 4594 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARID3AQ99856 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
ARID3AQ99856 AC010491.1-201ENST00000563101 2797 ntBASIC18.42■□□□□ 0.54
ARID3AQ99856 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 FAM45BP-202ENST00000592932 1624 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 CICP20-201ENST00000443330 2801 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 GPR89P-201ENST00000407924 1495 ntBASIC18.41■□□□□ 0.54
ARID3AQ99856 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ARID3AQ99856 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARID3AQ99856 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
ARID3AQ99856 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms