Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AC023908.3-201ENST00000564211 3047 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 AC139749.1-202ENST00000617529 3139 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 RPS2P1-201ENST00000434010 821 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AL589182.2-201ENST00000619332 1049 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CLCC1Q96S66 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.64□□□□□ -0.23
CLCC1Q96S66 AL590787.1-201ENST00000568856 1315 ntBASIC13.64□□□□□ -0.23
CLCC1Q96S66 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC243591.1-201ENST00000452967 1364 ntBASIC13.63□□□□□ -0.23
CLCC1Q96S66 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 FAM197Y8-203ENST00000450145 560 ntBASIC13.63□□□□□ -0.23
CLCC1Q96S66 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 OR7E14P-202ENST00000530490 1290 ntBASIC13.63□□□□□ -0.23
CLCC1Q96S66 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CLCC1Q96S66 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CLCC1Q96S66 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLCC1Q96S66 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLCC1Q96S66 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CLCC1Q96S66 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLCC1Q96S66 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLCC1Q96S66 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLCC1Q96S66 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms