Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CYP4F24P-201ENST00000586049 1580 ntBASIC19.02■□□□□ 0.64
NEK1Q96PY6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 SPDYE14P-201ENST00000442619 822 ntBASIC19.02■□□□□ 0.64
NEK1Q96PY6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.02■□□□□ 0.64
NEK1Q96PY6 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.02■□□□□ 0.64
NEK1Q96PY6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NEK1Q96PY6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
NEK1Q96PY6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK1Q96PY6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK1Q96PY6 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
NEK1Q96PY6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
NEK1Q96PY6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC018892.3-201ENST00000623986 2499 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 CNN2P11-201ENST00000429351 262 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC004967.1-201ENST00000453589 447 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC027796.2-201ENST00000575326 344 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC026979.3-201ENST00000607315 403 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
NEK1Q96PY6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 REXO1L1P-202ENST00000608646 1974 ntBASIC19.01■□□□□ 0.63
NEK1Q96PY6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NEK1Q96PY6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NEK1Q96PY6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NEK1Q96PY6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19■□□□□ 0.63
NEK1Q96PY6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms