Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 AL136379.1-201ENST00000623471 2642 ntBASIC16.62■□□□□ 0.25
C9orf72Q96LT7 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
C9orf72Q96LT7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AC112482.1-201ENST00000492080 688 ntBASIC16.61■□□□□ 0.25
C9orf72Q96LT7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 MTDHP5-201ENST00000598980 586 ntBASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AC023157.3-201ENST00000619086 2088 ntBASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
C9orf72Q96LT7 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.6■□□□□ 0.25
C9orf72Q96LT7 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms