Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 RNA5SP486-201ENST00000515961 83 ntBASIC18.55■□□□□ 0.56
CDCA5Q96FF9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 CHMP4BP1-201ENST00000556017 588 ntBASIC18.55■□□□□ 0.56
CDCA5Q96FF9 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 MIR4722-201ENST00000578292 60 ntBASIC18.55■□□□□ 0.56
CDCA5Q96FF9 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AC097359.3-201ENST00000603982 1210 ntBASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AC132938.4-201ENST00000623835 848 ntBASIC18.55■□□□□ 0.56
CDCA5Q96FF9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDCA5Q96FF9 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 MIR4706-201ENST00000582134 82 ntBASIC18.54■□□□□ 0.56
CDCA5Q96FF9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDCA5Q96FF9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 KRT8P19-201ENST00000551916 1455 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 MIR3619-201ENST00000579667 83 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AL451050.2-201ENST00000606967 682 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AC006453.4-201ENST00000636949 1252 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AC138627.1-207ENST00000641560 1006 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AC134407.2-201ENST00000625089 1978 ntBASIC18.53■□□□□ 0.56
CDCA5Q96FF9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDCA5Q96FF9 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 KRT8P35-201ENST00000483942 1338 ntBASIC18.52■□□□□ 0.56
CDCA5Q96FF9 HLA-A-202ENST00000376806 1854 ntBASIC18.52■□□□□ 0.56
CDCA5Q96FF9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDCA5Q96FF9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms