Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 FTH1P14-201ENST00000482930 551 ntBASIC19.65■□□□□ 0.74
RPGRQ92834 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRQ92834 CLUHP6-201ENST00000580789 941 ntBASIC19.65■□□□□ 0.74
RPGRQ92834 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RPGRQ92834 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
RPGRQ92834 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRQ92834 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRQ92834 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.64■□□□□ 0.74
RPGRQ92834 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRQ92834 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRQ92834 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.64■□□□□ 0.73
RPGRQ92834 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC19.64■□□□□ 0.73
RPGRQ92834 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.64■□□□□ 0.73
RPGRQ92834 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRQ92834 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRQ92834 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RPGRQ92834 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.64■□□□□ 0.73
RPGRQ92834 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRQ92834 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRQ92834 AC134312.5-201ENST00000568031 1313 ntBASIC19.64■□□□□ 0.73
RPGRQ92834 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRQ92834 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRQ92834 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRQ92834 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRQ92834 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC19.63■□□□□ 0.73
RPGRQ92834 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPGRQ92834 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.63■□□□□ 0.73
RPGRQ92834 AP001282.1-201ENST00000531301 1499 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 AC020907.1-201ENST00000616460 1350 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RPGRQ92834 AC016694.1-201ENST00000434179 700 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.63■□□□□ 0.73
RPGRQ92834 AP001063.1-201ENST00000568332 529 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.63■□□□□ 0.73
RPGRQ92834 AL450472.2-201ENST00000603663 1156 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 AC084346.2-201ENST00000607097 949 ntBASIC19.63■□□□□ 0.73
RPGRQ92834 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRQ92834 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RPGRQ92834 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.62■□□□□ 0.73
RPGRQ92834 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.62■□□□□ 0.73
RPGRQ92834 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPGRQ92834 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRQ92834 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RPGRQ92834 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms