Protein–RNA interactions for Protein: Q8WW12

PCNP, PEST proteolytic signal-containing nuclear protein, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPQ8WW12 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 FSCN1P1-201ENST00000568912 1481 ntBASIC13.37□□□□□ -0.27
PCNPQ8WW12 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AC109462.3-201ENST00000573934 613 ntBASIC13.37□□□□□ -0.27
PCNPQ8WW12 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 AC097359.2-201ENST00000604992 2389 ntBASIC13.37□□□□□ -0.27
PCNPQ8WW12 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PCNPQ8WW12 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.37□□□□□ -0.27
PCNPQ8WW12 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 MYCLP1-201ENST00000372451 1075 ntBASIC13.36□□□□□ -0.27
PCNPQ8WW12 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 RPS2P55-201ENST00000397318 883 ntBASIC13.36□□□□□ -0.27
PCNPQ8WW12 AC107956.1-201ENST00000494359 873 ntBASIC13.36□□□□□ -0.27
PCNPQ8WW12 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 BX640514.1-201ENST00000583223 1918 ntBASIC13.36□□□□□ -0.27
PCNPQ8WW12 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 AC067750.1-201ENST00000608826 6545 ntBASIC13.36□□□□□ -0.27
PCNPQ8WW12 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PCNPQ8WW12 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PCNPQ8WW12 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PCNPQ8WW12 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PCNPQ8WW12 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms