Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.25■□□□□ 0.35
BEST2Q8NFU1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AZGP1P1-201ENST00000411909 902 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 SPTLC1P1-201ENST00000447199 261 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AC004840.1-201ENST00000636359 365 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AL109936.8-201ENST00000641772 604 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 AL118508.1-201ENST00000613502 2345 ntBASIC17.24■□□□□ 0.35
BEST2Q8NFU1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.24■□□□□ 0.35
BEST2Q8NFU1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AC114501.2-201ENST00000439631 535 ntBASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.23■□□□□ 0.35
BEST2Q8NFU1 AC099398.1-201ENST00000567919 2776 ntBASIC17.23■□□□□ 0.35
BEST2Q8NFU1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms