Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 C1QBPP1-201ENST00000400117 770 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 EMC4-209ENST00000559421 497 ntTSL 2 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AC243960.2-201ENST00000600996 747 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 AL139099.5-201ENST00000635274 300 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 HCG11-201ENST00000411553 5696 ntBASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CARMIL3Q8ND23 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 MIR1247-201ENST00000408206 136 ntBASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 GOLGA2P4-201ENST00000441462 777 ntBASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AGER-214ENST00000538695 487 ntTSL 2 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 C2orf69P2-201ENST00000562032 1123 ntBASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AC009486.1-201ENST00000569860 813 ntBASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 CLUHP6-201ENST00000580789 941 ntBASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CARMIL3Q8ND23 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 ZBTB45P2-201ENST00000452245 1531 ntBASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AC012441.1-201ENST00000446669 685 ntBASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.93■□□□□ 0.78
CARMIL3Q8ND23 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms