Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 HYMAI-201ENST00000635591 3347 ntBASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TTC9CQ8N5M4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 ELL2P1-201ENST00000413990 1906 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AC142381.1-201ENST00000426099 345 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 COX10-202ENST00000429152 875 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AP000347.1-202ENST00000435868 847 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SPCS2P4-201ENST00000436160 681 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AP000842.3-202ENST00000569238 1080 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 LINC02199-201ENST00000506655 2702 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 FOXO1B-201ENST00000504678 1527 ntBASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TTC9CQ8N5M4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 FAM220BP-201ENST00000377689 816 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 CEND1P1-201ENST00000451006 455 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TIMM8BP1-201ENST00000452384 211 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms