Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC092337.1-201ENST00000568699 1129 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 LINC02560-201ENST00000596379 459 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AL450472.2-201ENST00000603663 1156 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC074044.1-201ENST00000609673 707 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC008761.3-201ENST00000624803 892 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC004461.2-201ENST00000629517 803 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 AC079328.2-201ENST00000561241 3354 ntBASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ARHGEF39Q8N4T4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CROCCP1-201ENST00000426910 5675 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC135586.1-201ENST00000539323 574 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC009118.2-201ENST00000613275 655 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ARHGEF39Q8N4T4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.09■□□□□ 0.01
ARHGEF39Q8N4T4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms