Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AC140912.1-201ENST00000577171 1054 ntBASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AL359881.2-201ENST00000602973 570 ntBASIC17.47■□□□□ 0.39
VPS52Q8N1B4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 BTBD7P1-201ENST00000447253 1453 ntBASIC17.47■□□□□ 0.39
VPS52Q8N1B4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
VPS52Q8N1B4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 RN7SL618P-201ENST00000477850 296 ntBASIC17.46■□□□□ 0.39
VPS52Q8N1B4 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 AC104794.3-201ENST00000566840 1248 ntBASIC17.46■□□□□ 0.39
VPS52Q8N1B4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
VPS52Q8N1B4 AL391256.1-201ENST00000443260 1855 ntBASIC17.46■□□□□ 0.38
VPS52Q8N1B4 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
VPS52Q8N1B4 TSPY26P-202ENST00000565928 3884 ntBASIC17.46■□□□□ 0.38
VPS52Q8N1B4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC138969.3-201ENST00000546612 1459 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC138932.2-201ENST00000548268 1459 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC126755.4-201ENST00000549796 1459 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC007274.1-201ENST00000439805 662 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC093724.1-201ENST00000448659 1027 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 ZNF890P-202ENST00000530367 1156 ntBASIC17.45■□□□□ 0.38
VPS52Q8N1B4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.45■□□□□ 0.38
VPS52Q8N1B4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms