Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 AL583810.1-201ENST00000553344 1045 ntBASIC17.06■□□□□ 0.32
RNF135Q8IUD6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 LINC00895-201ENST00000629028 1637 ntBASIC17.06■□□□□ 0.32
RNF135Q8IUD6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF135Q8IUD6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AL391256.1-201ENST00000443260 1855 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC023310.3-201ENST00000557027 670 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC100756.1-201ENST00000562736 682 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC138749.3-201ENST00000567691 622 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC103810.3-201ENST00000583567 96 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC116165.1-201ENST00000611806 668 ntBASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF135Q8IUD6 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC092171.3-201ENST00000610122 2651 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC092506.1-202ENST00000401022 528 ntBASIC17.04■□□□□ 0.32
RNF135Q8IUD6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF135Q8IUD6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms